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package net.bmahe.genetics4j.neat.mutation.chromosome; |
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import java.util.ArrayList; |
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import java.util.List; |
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5
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import java.util.random.RandomGenerator; |
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7
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import org.apache.commons.lang3.Validate; |
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import org.apache.logging.log4j.LogManager; |
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import org.apache.logging.log4j.Logger; |
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import net.bmahe.genetics4j.core.chromosomes.Chromosome; |
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import net.bmahe.genetics4j.core.mutation.chromosome.ChromosomeMutationHandler; |
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import net.bmahe.genetics4j.core.spec.chromosome.ChromosomeSpec; |
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import net.bmahe.genetics4j.core.spec.mutation.MutationPolicy; |
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import net.bmahe.genetics4j.neat.Connection; |
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import net.bmahe.genetics4j.neat.chromosomes.NeatChromosome; |
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import net.bmahe.genetics4j.neat.spec.NeatChromosomeSpec; |
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import net.bmahe.genetics4j.neat.spec.mutation.DeleteConnection; |
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public class NeatChromosomeDeleteConnection implements ChromosomeMutationHandler<NeatChromosome> { |
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public static final Logger logger = LogManager.getLogger(NeatChromosomeDeleteConnection.class); |
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private final RandomGenerator randomGenerator; |
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public NeatChromosomeDeleteConnection(final RandomGenerator _randomGenerator) { |
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27
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Validate.notNull(_randomGenerator); |
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28
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29
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1
1. <init> : Removed assignment to member variable randomGenerator → KILLED
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this.randomGenerator = _randomGenerator; |
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} |
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31
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@Override |
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public boolean canHandle(final MutationPolicy mutationPolicy, final ChromosomeSpec chromosome) { |
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Validate.notNull(mutationPolicy); |
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Validate.notNull(chromosome); |
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37
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9
1. canHandle : negated conditional → KILLED
2. canHandle : replaced boolean return with true for net/bmahe/genetics4j/neat/mutation/chromosome/NeatChromosomeDeleteConnection::canHandle → KILLED
3. canHandle : negated conditional → KILLED
4. canHandle : removed conditional - replaced equality check with false → KILLED
5. canHandle : removed conditional - replaced equality check with true → KILLED
6. canHandle : removed conditional - replaced equality check with false → KILLED
7. canHandle : Substituted 1 with 0 → KILLED
8. canHandle : Substituted 0 with 1 → KILLED
9. canHandle : removed conditional - replaced equality check with true → KILLED
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return mutationPolicy instanceof DeleteConnection && chromosome instanceof NeatChromosomeSpec; |
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} |
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@Override |
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public NeatChromosome mutate(final MutationPolicy mutationPolicy, final Chromosome chromosome) { |
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Validate.notNull(mutationPolicy); |
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Validate.notNull(chromosome); |
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Validate.isInstanceOf(DeleteConnection.class, mutationPolicy); |
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Validate.isInstanceOf(NeatChromosome.class, chromosome); |
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final var neatChromosome = (NeatChromosome) chromosome; |
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48
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1
1. mutate : removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getNumInputs → KILLED
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final var numInputs = neatChromosome.getNumInputs(); |
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49
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1
1. mutate : removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getNumOutputs → KILLED
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final var numOutputs = neatChromosome.getNumOutputs(); |
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50
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1
1. mutate : removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getMinWeightValue → SURVIVED
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final var minValue = neatChromosome.getMinWeightValue(); |
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51
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1
1. mutate : removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getMaxWeightValue → SURVIVED
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final var maxValue = neatChromosome.getMaxWeightValue(); |
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53
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1
1. mutate : removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getConnections → KILLED
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final var oldConnections = neatChromosome.getConnections(); |
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54
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1. mutate : removed call to java/util/ArrayList::<init> → KILLED
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final List<Connection> newConnections = new ArrayList<>(oldConnections); |
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56
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5
1. mutate : changed conditional boundary → KILLED
2. mutate : removed conditional - replaced comparison check with true → KILLED
3. mutate : negated conditional → KILLED
4. mutate : removed conditional - replaced comparison check with false → KILLED
5. mutate : removed call to java/util/List::size → KILLED
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if (oldConnections.size() > 0) { |
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57
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3
1. mutate : removed call to java/util/List::size → SURVIVED
2. mutate : replaced call to java/util/random/RandomGenerator::nextInt with argument → KILLED
3. mutate : removed call to java/util/random/RandomGenerator::nextInt → KILLED
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final int connectionToDeleteIndex = randomGenerator.nextInt(oldConnections.size()); |
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1
1. mutate : removed call to java/util/List::remove → KILLED
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newConnections.remove(connectionToDeleteIndex); |
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} |
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61
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2
1. mutate : replaced return value with null for net/bmahe/genetics4j/neat/mutation/chromosome/NeatChromosomeDeleteConnection::mutate → KILLED
2. mutate : removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::<init> → KILLED
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return new NeatChromosome(numInputs, numOutputs, minValue, maxValue, newConnections); |
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} |
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} |
| | Mutations |
| 29 |
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1.1
Location : <init>
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateConnectionExist()] Removed assignment to member variable randomGenerator → KILLED
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| 37 |
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1.1
Location : canHandle
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:canHandle()] negated conditional → KILLED
2.2
Location : canHandle
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:canHandle()] replaced boolean return with true for net/bmahe/genetics4j/neat/mutation/chromosome/NeatChromosomeDeleteConnection::canHandle → KILLED
3.3
Location : canHandle
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:canHandle()] negated conditional → KILLED
4.4
Location : canHandle
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:canHandle()] removed conditional - replaced equality check with false → KILLED
5.5
Location : canHandle
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:canHandle()] removed conditional - replaced equality check with true → KILLED
6.6
Location : canHandle
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:canHandle()] removed conditional - replaced equality check with false → KILLED
7.7
Location : canHandle
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:canHandle()] Substituted 1 with 0 → KILLED
8.8
Location : canHandle
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:canHandle()] Substituted 0 with 1 → KILLED
9.9
Location : canHandle
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:canHandle()] removed conditional - replaced equality check with true → KILLED
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| 48 |
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1.1
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()] removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getNumInputs → KILLED
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| 49 |
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1.1
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()] removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getNumOutputs → KILLED
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| 50 |
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1.1
Location : mutate
Killed by : none removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getMinWeightValue → SURVIVED
Covering tests
Covered by tests:
- net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()]
- net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateConnectionExist()]
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| 51 |
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1.1
Location : mutate
Killed by : none removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getMaxWeightValue → SURVIVED
Covering tests
Covered by tests:
- net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()]
- net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateConnectionExist()]
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| 53 |
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1.1
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()] removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::getConnections → KILLED
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| 54 |
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1.1
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()] removed call to java/util/ArrayList::<init> → KILLED
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| 56 |
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1.1
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()] changed conditional boundary → KILLED
2.2
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()] removed conditional - replaced comparison check with true → KILLED
3.3
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()] negated conditional → KILLED
4.4
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateConnectionExist()] removed conditional - replaced comparison check with false → KILLED
5.5
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateConnectionExist()] removed call to java/util/List::size → KILLED
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| 57 |
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1.1
Location : mutate
Killed by : none removed call to java/util/List::size → SURVIVED
Covering tests
Covered by tests:
- net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateConnectionExist()]
2.2
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateConnectionExist()] replaced call to java/util/random/RandomGenerator::nextInt with argument → KILLED
3.3
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateConnectionExist()] removed call to java/util/random/RandomGenerator::nextInt → KILLED
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| 58 |
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1.1
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateConnectionExist()] removed call to java/util/List::remove → KILLED
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| 61 |
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1.1
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()] replaced return value with null for net/bmahe/genetics4j/neat/mutation/chromosome/NeatChromosomeDeleteConnection::mutate → KILLED
2.2
Location : mutate
Killed by : net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest.[engine:junit-jupiter]/[class:net.bmahe.genetics4j.neat.mutation.chromosome.NeatChromosomeDeleteConnectionTest]/[method:mutateEmptyConnection()] removed call to net/bmahe/genetics4j/neat/chromosomes/NeatChromosome::<init> → KILLED
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