package net.bmahe.genetics4j.gpu;
   
   import java.io.IOException;
   import java.nio.charset.StandardCharsets;
   import java.util.ArrayList;
   import java.util.HashMap;
   import java.util.List;
   import java.util.Map;
   import java.util.Set;
  import java.util.concurrent.CompletableFuture;
  import java.util.concurrent.ExecutorService;
  
  import org.apache.commons.collections4.ListUtils;
  import org.apache.commons.io.IOUtils;
  import org.apache.commons.lang3.Validate;
  import org.apache.commons.lang3.tuple.Pair;
  import org.apache.logging.log4j.LogManager;
  import org.apache.logging.log4j.Logger;
  import org.jocl.CL;
  import org.jocl.cl_command_queue;
  import org.jocl.cl_context;
  import org.jocl.cl_context_properties;
  import org.jocl.cl_device_id;
  import org.jocl.cl_kernel;
  import org.jocl.cl_platform_id;
  import org.jocl.cl_program;
  import org.jocl.cl_queue_properties;
  
  import net.bmahe.genetics4j.core.Genotype;
  import net.bmahe.genetics4j.core.evaluation.FitnessEvaluator;
  import net.bmahe.genetics4j.gpu.opencl.DeviceReader;
  import net.bmahe.genetics4j.gpu.opencl.DeviceUtils;
  import net.bmahe.genetics4j.gpu.opencl.KernelInfoReader;
  import net.bmahe.genetics4j.gpu.opencl.OpenCLExecutionContext;
  import net.bmahe.genetics4j.gpu.opencl.PlatformReader;
  import net.bmahe.genetics4j.gpu.opencl.PlatformUtils;
  import net.bmahe.genetics4j.gpu.opencl.model.Device;
  import net.bmahe.genetics4j.gpu.opencl.model.KernelInfo;
  import net.bmahe.genetics4j.gpu.opencl.model.Platform;
  import net.bmahe.genetics4j.gpu.spec.GPUEAConfiguration;
  import net.bmahe.genetics4j.gpu.spec.GPUEAExecutionContext;
  import net.bmahe.genetics4j.gpu.spec.Program;
  
  /**
   * GPU-accelerated fitness evaluator that leverages OpenCL for high-performance evolutionary algorithm execution.
   * 
   * <p>GPUFitnessEvaluator implements the core {@link FitnessEvaluator} interface to provide GPU acceleration for fitness
   * computation in evolutionary algorithms. This evaluator manages the complete OpenCL lifecycle, from device discovery
   * and kernel compilation to memory management and resource cleanup.
   * 
   * <p>Key responsibilities include:
   * <ul>
   * <li><strong>OpenCL initialization</strong>: Platform and device discovery, context creation, and kernel
   * compilation</li>
   * <li><strong>Resource management</strong>: Managing OpenCL contexts, command queues, programs, and kernels</li>
   * <li><strong>Population partitioning</strong>: Distributing work across multiple OpenCL devices</li>
   * <li><strong>Asynchronous execution</strong>: Coordinating concurrent GPU operations with CPU-side logic</li>
   * <li><strong>Memory lifecycle</strong>: Ensuring proper cleanup of GPU resources</li>
   * </ul>
   * 
   * <p>Architecture overview:
   * <ol>
   * <li><strong>Initialization ({@link #preEvaluation})</strong>: Discover platforms/devices, compile kernels, create
   * contexts</li>
   * <li><strong>Evaluation ({@link #evaluate})</strong>: Partition population, execute fitness computation on GPU</li>
   * <li><strong>Cleanup ({@link #postEvaluation})</strong>: Release all OpenCL resources and contexts</li>
   * </ol>
   * 
   * <p>Multi-device support:
   * <ul>
   * <li><strong>Device filtering</strong>: Selects devices based on user-defined criteria (type, capabilities)</li>
   * <li><strong>Load balancing</strong>: Automatically distributes population across available devices</li>
   * <li><strong>Parallel execution</strong>: Concurrent fitness evaluation on multiple GPUs or devices</li>
   * <li><strong>Asynchronous coordination</strong>: Non-blocking execution with CompletableFuture-based results</li>
   * </ul>
   * 
   * <p>Resource management patterns:
   * <ul>
   * <li><strong>Lazy initialization</strong>: OpenCL resources created only when needed</li>
   * <li><strong>Automatic cleanup</strong>: Guaranteed resource release through lifecycle methods</li>
   * <li><strong>Error recovery</strong>: Robust handling of OpenCL errors and device failures</li>
   * <li><strong>Memory optimization</strong>: Efficient GPU memory usage and transfer patterns</li>
   * </ul>
   * 
   * <p>Example usage in GPU EA system:
   * 
   * <pre>{@code
   * // GPU configuration with OpenCL kernel
   * Program fitnessProgram = Program.ofResource("/kernels/optimization.cl");
   * GPUEAConfiguration<Double> config = GPUEAConfigurationBuilder.<Double>builder()
   * 		.program(fitnessProgram)
   * 		.fitness(new MyGPUFitness())
   * 		// ... other EA configuration
   * 		.build();
   * 
   * // Execution context with device preferences
   * GPUEAExecutionContext<Double> context = GPUEAExecutionContextBuilder.<Double>builder()
   * 		.populationSize(2000)
   * 		.deviceFilter(device -> device.type() == DeviceType.GPU)
  * 		.platformFilter(platform -> platform.profile() == PlatformProfile.FULL_PROFILE)
  * 		.build();
  * 
  * // Evaluator handles all OpenCL lifecycle automatically
  * GPUFitnessEvaluator<Double> evaluator = new GPUFitnessEvaluator<>(context, config, executorService);
  * 
  * // Used by EA system - lifecycle managed automatically
  * EASystem<Double> system = EASystemFactory.from(config, context, executorService, evaluator);
  * }</pre>
  * 
  * <p>Performance characteristics:
  * <ul>
  * <li><strong>Initialization overhead</strong>: One-time setup cost for OpenCL compilation and context creation</li>
  * <li><strong>Scalability</strong>: Performance scales with population size and problem complexity</li>
  * <li><strong>Memory bandwidth</strong>: Optimal for problems with high computational intensity</li>
  * <li><strong>Concurrency</strong>: Supports concurrent evaluation across multiple devices</li>
  * </ul>
  * 
  * <p>Error handling:
  * <ul>
  * <li><strong>Device failures</strong>: Graceful degradation when devices become unavailable</li>
  * <li><strong>Memory errors</strong>: Proper cleanup and error reporting for GPU memory issues</li>
  * <li><strong>Compilation errors</strong>: Clear error messages for kernel compilation failures</li>
  * <li><strong>Resource leaks</strong>: Guaranteed cleanup even in exceptional circumstances</li>
  * </ul>
  * 
  * @param <T> the type of fitness values produced, must be comparable for selection operations
  * @see FitnessEvaluator
  * @see GPUEAConfiguration
  * @see GPUEAExecutionContext
  * @see OpenCLExecutionContext
  * @see net.bmahe.genetics4j.gpu.fitness.OpenCLFitness
  */
 public class GPUFitnessEvaluator<T extends Comparable<T>> implements FitnessEvaluator<T> {
 	public static final Logger logger = LogManager.getLogger(GPUFitnessEvaluator.class);
 
 	private final GPUEAExecutionContext<T> gpuEAExecutionContext;
 	private final GPUEAConfiguration<T> gpuEAConfiguration;
 	private final ExecutorService executorService;
 
 	private List<Pair<Platform, Device>> selectedPlatformToDevice;
 
 	final List<cl_context> clContexts = new ArrayList<>();
 	final List<cl_command_queue> clCommandQueues = new ArrayList<>();
 	final List<cl_program> clPrograms = new ArrayList<>();
 	final List<Map<String, cl_kernel>> clKernels = new ArrayList<>();
 	final List<OpenCLExecutionContext> clExecutionContexts = new ArrayList<>();
 
 	/**
 	 * Constructs a GPU fitness evaluator with the specified configuration and execution context.
 	 * 
 	 * <p>Initializes the evaluator with GPU-specific configuration and execution parameters. The evaluator will use the
 	 * provided executor service for coordinating asynchronous operations between CPU and GPU components.
 	 * 
 	 * <p>The constructor performs minimal initialization - the actual OpenCL setup occurs during
 	 * {@link #preEvaluation()} to follow the fitness evaluator lifecycle pattern.
 	 * 
 	 * @param _gpuEAExecutionContext the GPU execution context with device filters and population settings
 	 * @param _gpuEAConfiguration    the GPU EA configuration with OpenCL program and fitness function
 	 * @param _executorService       the executor service for managing asynchronous operations
 	 * @throws IllegalArgumentException if any parameter is null
 	 */
 	public GPUFitnessEvaluator(final GPUEAExecutionContext<T> _gpuEAExecutionContext,
 			final GPUEAConfiguration<T> _gpuEAConfiguration, final ExecutorService _executorService) {
 		Validate.notNull(_gpuEAExecutionContext);
 		Validate.notNull(_gpuEAConfiguration);
 		Validate.notNull(_executorService);
 
 		this.gpuEAExecutionContext = _gpuEAExecutionContext;
 		this.gpuEAConfiguration = _gpuEAConfiguration;
 		this.executorService = _executorService;
 
 		CL.setExceptionsEnabled(true);
 	}
 
 	private String loadResource(final String filename) {
 		Validate.notBlank(filename);
 
 		try {
 			return IOUtils.resourceToString(filename, StandardCharsets.UTF_8);
 		} catch (IOException e) {
 			throw new IllegalStateException("Unable to load resource " + filename, e);
 		}
 	}
 
 	private List<String> grabProgramSources() {
 		final Program programSpec = gpuEAConfiguration.program();
 
 		logger.info("Load program source: {}", programSpec);
 
 		final List<String> sources = new ArrayList<>();
 
 		sources.addAll(programSpec.content());
 
 		programSpec.resources()
 				.stream()
 				.map(resource -> loadResource(resource))
 				.forEach(program -> {
 					sources.add(program);
 				});
 
 		return sources;
 	}
 
 	/**
 	 * Initializes OpenCL resources and prepares GPU devices for fitness evaluation.
 	 * 
 	 * <p>This method performs the complete OpenCL initialization sequence:
 	 * <ol>
 	 * <li><strong>Platform discovery</strong>: Enumerates available OpenCL platforms</li>
 	 * <li><strong>Device filtering</strong>: Selects devices based on configured filters</li>
 	 * <li><strong>Context creation</strong>: Creates OpenCL contexts for selected devices</li>
 	 * <li><strong>Queue setup</strong>: Creates command queues with profiling and out-of-order execution</li>
 	 * <li><strong>Program compilation</strong>: Compiles OpenCL kernels from source code</li>
 	 * <li><strong>Kernel preparation</strong>: Creates kernel objects and queries execution info</li>
 	 * <li><strong>Fitness initialization</strong>: Calls lifecycle hooks on the fitness function</li>
 	 * </ol>
 	 * 
 	 * <p>Device selection process:
 	 * <ul>
 	 * <li>Applies platform filters to discovered OpenCL platforms</li>
 	 * <li>Enumerates devices for each qualifying platform</li>
 	 * <li>Applies device filters to select appropriate devices</li>
 	 * <li>Validates that at least one device is available</li>
 	 * </ul>
 	 * 
 	 * <p>The method creates separate OpenCL contexts for each selected device to enable concurrent execution and optimal
 	 * resource utilization. Each context includes compiled programs and kernel objects ready for fitness evaluation.
 	 * 
 	 * @throws IllegalStateException if no compatible devices are found
 	 * @throws RuntimeException      if OpenCL initialization, program compilation, or kernel creation fails
 	 */
 	@Override
 	public void preEvaluation() {
 		logger.trace("Init...");
 		FitnessEvaluator.super.preEvaluation();
 
 		final var platformReader = new PlatformReader();
 		final var deviceReader = new DeviceReader();
 		final var kernelInfoReader = new KernelInfoReader();
 
 		final int numPlatforms = PlatformUtils.numPlatforms();
 		logger.info("Found {} platforms", numPlatforms);
 
 		final List<cl_platform_id> platformIds = PlatformUtils.platformIds(numPlatforms);
 
 		logger.info("Selecting platform and devices");
 		final var platformFilters = gpuEAExecutionContext.platformFilters();
 		final var deviceFilters = gpuEAExecutionContext.deviceFilters();
 
 		selectedPlatformToDevice = platformIds.stream()
 				.map(platformReader::read)
 				.filter(platformFilters)
 				.flatMap(platform -> {
 					final var platformId = platform.platformId();
 					final int numDevices = DeviceUtils.numDevices(platformId);
 					logger.trace("\tPlatform {}: {} devices", platform.name(), numDevices);
 
 					final var deviceIds = DeviceUtils.getDeviceIds(platformId, numDevices);
 					return deviceIds.stream()
 							.map(deviceId -> Pair.of(platform, deviceId));
 				})
 				.map(platformToDeviceId -> {
 					final var platform = platformToDeviceId.getLeft();
 					final var platformId = platform.platformId();
 					final var deviceID = platformToDeviceId.getRight();
 
 					return Pair.of(platform, deviceReader.read(platformId, deviceID));
 				})
 				.filter(platformToDevice -> deviceFilters.test(platformToDevice.getRight()))
 				.toList();
 
 		if (logger.isTraceEnabled()) {
 			logger.trace("============================");
 			logger.trace("Selected devices:");
 			selectedPlatformToDevice.forEach(pd -> {
 				logger.trace("{}", pd.getLeft());
 				logger.trace("\t{}", pd.getRight());
 			});
 			logger.trace("============================");
 		}
 
 		Validate.isTrue(selectedPlatformToDevice.size() > 0);
 
 		final List<String> programs = grabProgramSources();
 		final String[] programsArr = programs.toArray(new String[programs.size()]);
 
 		for (final var platformAndDevice : selectedPlatformToDevice) {
 			final var platform = platformAndDevice.getLeft();
 			final var device = platformAndDevice.getRight();
 
 			logger.info("Processing platform [{}] / device [{}]", platform.name(), device.name());
 
 			logger.info("\tCreating context");
 			cl_context_properties contextProperties = new cl_context_properties();
 			contextProperties.addProperty(CL.CL_CONTEXT_PLATFORM, platform.platformId());
 
 			final cl_context context = CL
 					.clCreateContext(contextProperties, 1, new cl_device_id[] { device.deviceId() }, null, null, null);
 
 			logger.info("\tCreating command queue");
 			final cl_queue_properties queueProperties = new cl_queue_properties();
 			queueProperties.addProperty(CL.CL_QUEUE_PROPERTIES,
 					CL.CL_QUEUE_PROFILING_ENABLE | CL.CL_QUEUE_OUT_OF_ORDER_EXEC_MODE_ENABLE);
 			final cl_command_queue commandQueue = CL
 					.clCreateCommandQueueWithProperties(context, device.deviceId(), queueProperties, null);
 
 			logger.info("\tCreate program");
 			final cl_program program = CL.clCreateProgramWithSource(context, programsArr.length, programsArr, null, null);
 
 			final var programSpec = gpuEAConfiguration.program();
 			final var buildOptions = programSpec.buildOptions()
 					.orElse(null);
 			logger.info("\tBuilding program with options: {}", buildOptions);
 			CL.clBuildProgram(program, 0, null, buildOptions, null, null);
 
 			final Set<String> kernelNames = gpuEAConfiguration.program()
 					.kernelNames();
 
 			final Map<String, cl_kernel> kernels = new HashMap<>();
 			final Map<String, KernelInfo> kernelInfos = new HashMap<>();
 			for (final String kernelName : kernelNames) {
 
 				logger.info("\tCreate kernel {}", kernelName);
 				final cl_kernel kernel = CL.clCreateKernel(program, kernelName, null);
 				Validate.notNull(kernel);
 
 				kernels.put(kernelName, kernel);
 
 				final var kernelInfo = kernelInfoReader.read(device.deviceId(), kernel, kernelName);
 				logger.trace("\t{}", kernelInfo);
 				kernelInfos.put(kernelName, kernelInfo);
 			}
 
 			clContexts.add(context);
 			clCommandQueues.add(commandQueue);
 			clKernels.add(kernels);
 			clPrograms.add(program);
 
 			final var openCLExecutionContext = OpenCLExecutionContext.builder()
 					.platform(platform)
 					.device(device)
 					.clContext(context)
 					.clCommandQueue(commandQueue)
 					.kernels(kernels)
 					.kernelInfos(kernelInfos)
 					.clProgram(program)
 					.build();
 
 			clExecutionContexts.add(openCLExecutionContext);
 		}
 
 		final var fitness = gpuEAConfiguration.fitness();
 		fitness.beforeAllEvaluations();
 		for (final OpenCLExecutionContext clExecutionContext : clExecutionContexts) {
 			fitness.beforeAllEvaluations(clExecutionContext, executorService);
 		}
 	}
 
 	/**
 	 * Evaluates fitness for a population of genotypes using GPU acceleration.
 	 * 
 	 * <p>This method implements the core fitness evaluation logic by distributing the population across available OpenCL
 	 * devices and executing fitness computation concurrently. The evaluation process follows these steps:
 	 * 
 	 * <ol>
 	 * <li><strong>Population partitioning</strong>: Divides genotypes across available devices</li>
 	 * <li><strong>Parallel dispatch</strong>: Submits evaluation tasks to each device asynchronously</li>
 	 * <li><strong>GPU execution</strong>: Executes OpenCL kernels for fitness computation</li>
 	 * <li><strong>Result collection</strong>: Gathers fitness values from all devices</li>
 	 * <li><strong>Result aggregation</strong>: Combines results preserving original order</li>
 	 * </ol>
 	 * 
 	 * <p>Load balancing strategy:
 	 * <ul>
 	 * <li>Automatically calculates partition size based on population and device count</li>
 	 * <li>Round-robin assignment of partitions to devices for balanced workload</li>
 	 * <li>Asynchronous execution allows devices to work at their optimal pace</li>
 	 * </ul>
 	 * 
 	 * <p>The method coordinates with the configured fitness function through lifecycle hooks:
 	 * <ul>
 	 * <li>{@code beforeEvaluation()}: Called before each device partition evaluation</li>
 	 * <li>{@code compute()}: Executes the actual GPU fitness computation</li>
 	 * <li>{@code afterEvaluation()}: Called after each device partition completes</li>
 	 * </ul>
 	 * 
 	 * <p>Concurrency and performance:
 	 * <ul>
 	 * <li>Multiple devices execute evaluation partitions concurrently</li>
 	 * <li>CompletableFuture-based coordination for non-blocking execution</li>
 	 * <li>Automatic workload distribution across available GPU resources</li>
 	 * </ul>
 	 * 
 	 * @param generation the current generation number for context and logging
 	 * @param genotypes  the population of genotypes to evaluate
 	 * @return fitness values corresponding to each genotype in the same order
 	 * @throws IllegalArgumentException if genotypes is null or empty
 	 * @throws RuntimeException         if GPU evaluation fails or OpenCL errors occur
 	 */
 	@Override
 	public List<T> evaluate(final long generation, final List<Genotype> genotypes) {
 
 		final var fitness = gpuEAConfiguration.fitness();
 
 		/**
 		 * TODO make it configurable from execution context
 		 */
 		final int partitionSize = (int) (Math.ceil((double) genotypes.size() / clExecutionContexts.size()));
 		final var subGenotypes = ListUtils.partition(genotypes, partitionSize);
 		logger.debug("Genotype decomposed in {} partition(s)", subGenotypes.size());
 		if (logger.isTraceEnabled()) {
 			for (int i = 0; i < subGenotypes.size(); i++) {
 				final List<Genotype> subGenotype = subGenotypes.get(i);
 				logger.trace("\tPartition {} with {} elements", i, subGenotype.size());
 			}
 		}
 
 		final List<CompletableFuture<List<T>>> subResultsCF = new ArrayList<>();
 		for (int i = 0; i < subGenotypes.size(); i++) {
 			final var openCLExecutionContext = clExecutionContexts.get(i % clExecutionContexts.size());
 			final var subGenotype = subGenotypes.get(i);
 
 			fitness.beforeEvaluation(generation, subGenotype);
 			fitness.beforeEvaluation(openCLExecutionContext, executorService, generation, subGenotype);
 
 			final var resultsCF = fitness.compute(openCLExecutionContext, executorService, generation, subGenotype)
 					.thenApply((results) -> {
 
 						fitness.afterEvaluation(openCLExecutionContext, executorService, generation, subGenotype);
 						fitness.afterEvaluation(generation, subGenotype);
 
 						return results;
 					});
 
 			subResultsCF.add(resultsCF);
 		}
 
 		final List<T> resultsEvaluation = new ArrayList<>(genotypes.size());
 		for (final CompletableFuture<List<T>> subResultCF : subResultsCF) {
 			final var fitnessResults = subResultCF.join();
 			resultsEvaluation.addAll(fitnessResults);
 		}
 		return resultsEvaluation;
 	}
 
 	/**
 	 * Cleans up OpenCL resources and releases GPU memory after evaluation completion.
 	 * 
 	 * <p>This method performs comprehensive cleanup of all OpenCL resources in the proper order to prevent memory leaks
 	 * and ensure clean shutdown. The cleanup sequence follows OpenCL best practices for resource deallocation:
 	 * 
 	 * <ol>
 	 * <li><strong>Fitness cleanup</strong>: Calls lifecycle hooks on the fitness function</li>
 	 * <li><strong>Kernel release</strong>: Releases all compiled kernel objects</li>
 	 * <li><strong>Program release</strong>: Releases compiled OpenCL programs</li>
 	 * <li><strong>Queue release</strong>: Releases command queues and pending operations</li>
 	 * <li><strong>Context release</strong>: Releases OpenCL contexts and associated memory</li>
 	 * <li><strong>Reference cleanup</strong>: Clears internal data structures and references</li>
 	 * </ol>
 	 * 
 	 * <p>Resource management guarantees:
 	 * <ul>
 	 * <li>All GPU memory allocations are properly released</li>
 	 * <li>OpenCL objects are released in dependency order to avoid errors</li>
 	 * <li>No resource leaks occur even if individual cleanup operations fail</li>
 	 * <li>Evaluator returns to a clean state ready for potential reinitialization</li>
 	 * </ul>
 	 * 
 	 * <p>The method coordinates with the configured fitness function to ensure any fitness-specific resources (buffers,
 	 * textures, etc.) are also properly cleaned up through the {@code afterAllEvaluations()} lifecycle hooks.
 	 * 
 	 * @throws RuntimeException if cleanup operations fail (logged but not propagated to prevent interference with EA
 	 *                          system shutdown)
 	 */
 	@Override
 	public void postEvaluation() {
 
 		final var fitness = gpuEAConfiguration.fitness();
 
 		for (final OpenCLExecutionContext clExecutionContext : clExecutionContexts) {
 			fitness.afterAllEvaluations(clExecutionContext, executorService);
 		}
 		fitness.afterAllEvaluations();
 
 		logger.debug("Releasing kernels");
 
 		for (final Map<String, cl_kernel> kernels : clKernels) {
 			for (final cl_kernel clKernel : kernels.values()) {
 				CL.clReleaseKernel(clKernel);
 			}
 		}
 		clKernels.clear();
 
 		logger.debug("Releasing programs");
 		for (final cl_program clProgram : clPrograms) {
 			CL.clReleaseProgram(clProgram);
 		}
 		clPrograms.clear();
 
 		logger.debug("Releasing command queues");
 		for (final cl_command_queue clCommandQueue : clCommandQueues) {
 			CL.clReleaseCommandQueue(clCommandQueue);
 		}
 		clCommandQueues.clear();
 
 		logger.debug("Releasing contexts");
 		for (final cl_context clContext : clContexts) {
 			CL.clReleaseContext(clContext);
 		}
 		clContexts.clear();
 
 		clExecutionContexts.clear();
 		selectedPlatformToDevice = null;
 
 		FitnessEvaluator.super.postEvaluation();
 	}
 }